Сведения о научной работе Лукьянова К. А. за 2009-2014 гг Публикации в рецензируемых журналах




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Сведения о научной работе Лукьянова К.А. за 2009-2014 гг
Публикации в рецензируемых журналах:

  1. Serebrovskaya EO, Edelweiss EF, Stremovskiy OA, Lukyanov KA, Chudakov DM, Deyev SM. Targeting cancer cells by using an antireceptor antibody-photosensitizer fusion protein. Proc. Natl. Acad. Sci. USA. 2009, 106, 9221-9225.

  2. Bogdanov AM, Mishin AS, Yampolsky IV, Belousov VV, Chudakov DM, Subach FV, Verkhusha VV, Lukyanov S, Lukyanov KA. Green fluorescent proteins are light-induced electron donors. Nature Chem. Biol. 2009, 5, 459-461.

  3. Yampolsky I.V., Balashova T.A., Lukyanov K.A. Synthesis and spectral and chemical properties of the yellow fluorescent protein zFP538 chromophore. Biochemistry. 2009, 48, 8077-8082.

  4. Pletnev S., Gurskaya N.G., Pletneva N.V., Lukyanov K.A., Chudakov D.M., Martynov V.I., Popov V.O., Kovalchuk M.V., Wlodawer A., Dauter Z., Pletnev V. Structural basis for phototoxicity of the genetically encoded photosensitizer killer red. J. Biol. Chem. 2009, 284, 32028-32039.

  5. Ивашкин, П.И., Ямпольский И.В., Лукьянов К.А. Синтез и свойства хромофоров флуоресцентных белков Биоорган. химия, 35, 726-743.

  6. Bogdanov A.M., Bogdanova E.A., Chudakov D.M., Gorodnicheva T.V., Lukyanov S., Lukyanov K.A. Cell culture medium affects GFP photostability: a solution. Nature Methods. 2009, 6, 859-860.

  7. Чжан Л., Гурская Н.Г., Копанцева Е.Е., Мудрик Н.Н., Вагнер Л.Л., Лукьянов К.А., Чудаков Д.М. Выявление аминокислотных остатков, ответственных за способность к обратимой фотоконверсии мономерного красного флуоресцентного белка TagRFP. Биоорган. химия 2010, 36, 187-192.

  8. Pletneva NV, Pletnev VZ, Lukyanov KA, Gurskaya NG, Goryacheva EA, Martynov VI, Wlodawer A, Dauter Z, Pletnev S. Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis. J. Biol. Chem. 2010, 285, 15978-15984.

  9. Subach FV, Zhang L, Gadella TW, Gurskaya NG, Lukyanov KA, Verkhusha VV. Red fluorescent protein with reversibly photoswitchable absorbance for photochromic FRET. Chem. Biol. 2010, 17, 745-755.

  10. Lukyanov KA, Serebrovskaya EO, Lukyanov S, Chudakov DM. Fluorescent proteins as light-inducible photochemical partners. Photochem. Photobiol. Sci. 2010, 9, 1301-1306.

  11. Chudakov D.M., Matz M.V., Lukyanov S., Lukyanov K.A. Fluorescent proteins and their applications in imaging living cells and tissues. Physiol. Rev. 2010, 90, 1103-1163.

  12. Shcherbo D, Shemiakina II, Ryabova AV, Luker KE, Schmidt BT, Souslova EA, Gorodnicheva TV, Strukova L, Shidlovskiy KM, Britanova OV, Zaraisky AG, Lukyanov KA, Loschenov VB, Luker GD, Chudakov DM. Near-infrared fluorescent proteins. Nature Methods. 2010, 7, 827-829.

  13. Ivashkin PE, Lukyanov KA, Lukyanov S, Yampolsky IV. A synthetic GFP-like chromophore undergoes base-catalyzed autoxidation into acylimine red form. J. Org. Chem. 2011, 76, 2782-2791.

  14. Serebrovskaya EO, Gorodnicheva TV, Ermakova GV, Solovieva EA, Sharonov GV, Zagaynova EV, Chudakov DM, Lukyanov S, Zaraisky AG, Lukyanov KA. Light-induced blockage of cell division with a chromatin-targeted phototoxic fluorescent protein. Biochem. J. 2011, 435, 65-71.

  15. Серебровская Е.О., Стремовский О.А., Чудаков Д.М., Лукьянов К.А., Деев С.М. Генетически кодируемый иммунофотосенсибилизатор. Биоорг. химия 2011, 37, 137-144.

  16. Гурская Н.Г., Староверов Д.Б., Фрадков А.Ф., Лукьянов К.А. Кодирующая область дальнекрасного флуоресцентного белка Katushka содержит сильный донорный сайт сплайсинга. Биоорг. химия 2011, 37, 425-428

  17. Ивашкин П.Е., Лукьянов К.А., Ямпольский И.В. Синтез биосинтетических предшественников хромофоров красных флуоресцентных белков. Биоорг. химия 2011, 37, 464-474.

  18. Lukyanov K.A. Green-red flashers to accelerate biology. Chem. Biol. 2011, 18, 1202-1204.

  19. Gurskaya NG, Staroverov DB, Zhang L, Fradkov AF, Markina NM, Pereverzev AP, Lukyanov KA. Analysis of alternative splicing of cassette exons at single-cell level using two fluorescent proteins. Nucleic Acids Res. 2012, 40, e57.

  20. Baranov MS, Lukyanov KA, Borissova AO, Shamir J, Kosenkov D, Slipchenko LV, Tolbert LM, Yampolsky IV, Solntsev KM. Conformationally locked chromophores as models of excited-state proton transfer in fluorescent proteins. J. Am. Chem. Soc. 2012, 134, 6025-6032.

  21. Sarkisyan KS, Yampolsky IV, Solntsev KM, Lukyanov SA, Lukyanov KA, Mishin AS. Tryptophan-based chromophore in fluorescent proteins can be anionic. Sci. Rep. 2012, 2, 608.

  22. Lukyanov KA, Belousov VV. Biophotonics: The slow fade of cell fluorescence. Nature Photonics 2012, 6, 641–643.

  23. Bogdanov AM, Kudryavtseva EI, Lukyanov KA. Anti-fading media for live cell GFP imaging. PLoS One. 2012;7(12):e53004.

  24. Shirmanova MV, Serebrovskaya EO, Lukyanov KA, Snopova LB, Sirotkina MA, Prodanetz NN, Bugrova ML, Minakova EA, Turchin IV, Kamensky VA, Lukyanov SA, Zagaynova EV. Phototoxic effects of fluorescent protein KillerRed on tumor cells in mice. J Biophotonics. 2013, 6, 283-90.

  25. Pletnev V. Z., Pletneva N. V., Lukyanov K. A., Souslova E. A., Fradkov A. F., Chudakov D. M., Chepurnykh T., Yampolsky I. V., Wlodawer A., Dauter Z. and Pletnev S. Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine. Acta Crystallogr D Biol Crystallogr. (2013) D69, 1850-1860.

  26. Baranov M.S., Solntsev K.M., Lukyanov K.A. and Yampolsky I.V. Synthetic approach to GFP chromophore analogs from 3-azidocinnamates. Role of methyl rotors on the chromophore photophysics. Chem. Commun., 2013, 49 (51), 5778-5780.

  27. Баранов М.С, Лукьянов К.А., Ямпольский И.В. Синтез хромофоров флуоресцентных белков и их аналогов. Биоорганическая химия, 2013, 39, 255–276.

  28. Baranov M.S., Lukyanov K.A., Ivashkin P.E., Yampolsky I.V. An efficient synthetic approach to fluorescent oxazole-4-carboxylate derivatives. Synth. Commun., 2013, 43, 2337-2342.

  29. Ryumina AP, Serebrovskaya EO, Shirmanova MV, Snopova LB, Kuznetsova MM, Turchin IV, Ignatova NI, Klementieva NV, Fradkov AF, Shakhov BE, Zagaynova EV, Lukyanov KA, Lukyanov SA. Flavoprotein miniSOG as a genetically encoded photosensitizer for cancer cells. Biochim. Biophys. Acta. 2013, 1830, 5059-5067.

  30. Lukyanov KA, Belousov VV. Genetically encoded fluorescent redox sensors. Biochim Biophys Acta. 2014, 1840, 745-56.

  31. Serebrovskaya EO, Ryumina AP, Boulina ME, Shirmanova MV, Zagaynova EV, Bogdanova EA, Lukyanov SA, Lukyanov KA. Phototoxic effects of lysosome-associated genetically encoded photosensitizer KillerRed. J Biomed Opt. 2014, 19:071403.

  32. Makarov NS, Cirloganu C, Perry JW, Lukyanov KA, Solntsev KM. Steady-state and time-resolved spectroscopic studies of green-to-red photoconversion of fluorescent protein Dendra2. J. Photochem. Photobiol. A 2014, 280, 5-13.

  33. А.П. Переверзев, Н.М. Маркина, Ю.Г. Янушевич, Т.В. Городничева, Б.Э. Минасян, К.А. Лукьянов, Н.Г. Гурская. Усиление экспрессии химерных генов включением в их 3’-нетранслируемую область интрона 2 гена бета-глобина человека. Биоорг. химия 2014, 40, 293-296.

  34. Baranov MS, Solntsev KM, Baleeva NS, Mishin AS, Lukyanov SA, Lukyanov KA, Yampolsky IV. Red-Shifted Fluorescent Aminated Derivatives of Conformationally Locked GFP Chromophore. Chem. Eur. J. 2014 Aug 29. doi: 10.1002/chem.201403678.


Патенты:

    1. Bogdanov A.M., Lukyanov K.A. Methods and compositions for visualization of fluorescent proteins. WO2010122426 (A2), October 28, 2010.

    2. Ширманова М.В., Загайнова Е.В., Лукьянов С.А., Серебровская Е.О., Снопова Л.Б., Лукьянов К.А., Бугрова М.Л., Турчин И.В., Сироткина М.А., Каменский В.А. Способ фотодинамической терапии опухоли (Заявка № 2012139381 от 13.09.2012, решение о выдаче патента от 26.02.2014 г). Заявитель: ГБОУ ВПО НижГМА Минздрава РФ.




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